New Publications

In the months of October – November 2021, we published 110 publications

Make yourself familiar with our Research Publication Authorship, Affiliation and Acknowledgements Policy (NSWHP_PD_026).

Make your publication count:

All NSW Health Pathology author affiliation must include the following elements in the following order;

  1. The name of the clinical service or specialty;
  2. NSW Health Pathology (not New South Wales Health Pathology or NSW Pathology);
  3. Location of the service or specialty;
  4. and any additional partnership affiliations (where applicable);
  5. City and State, Country.

For example: 

1Microbiology, NSW Health Pathology, Westmead Hospital and Institute of Clinical Pathology and Medical Research, Westmead, NSW, Australia. 

 

NOVEMBER 2021

  1. Cell-based Culture Informs Infectivity and Safe De-Isolation Assessments in Patients with Coronavirus Disease 2019. Basile K, McPhie K, Carter I, Alderson S, Rahman H, Donovan L, Kumar S, Tran T, Ko D, Sivaruban T, Ngo C, Toi C, O'Sullivan MV, Sintchenko V, Chen SC, Maddocks S, Dwyer DE, Kok J. Clin Infect Dis. 2021 Nov 2;73(9): e2952-e2959. Q1 Infectious Diseases (SJR).
  2. Association Between Melanoma Detected During Routine Skin Checks and Mortality. Watts CG, McLoughlin K, Goumas C, van Kemenade CH, Aitken JF, Soyer HP, Fernandez Peñas P, Guitera P, Scolyer RA, Morton RL, Menzies SW, Caruana M, Kang YJ, Mann GJ, Chakera AH, Madronio CM, Armstrong BK, Thompson JF, Cust AE. JAMA Dermatol. 2021 Nov 3: e213884. Q1 Dermatology (SJR).
  3. What Do Biomedical Researchers Want from Biobanks? Results of an Online Survey. Rush A, Catchpoole DR, Reaiche-Miller G, Gilbert T, Ng W, Watson PH, Byrne JA. Biopreserv Biobank. 2021 Nov 9. Q2 Biochemistry, Genetics and Molecular Biology (miscellaneous (SJR)).
  4. In Reply. Cooper WA, Mahar A, Myers JL, Grainge C, Corte TJ, Williamson JP, Lau EMT, Raghu G, Troy LK. Arch Pathol Lab Med. 2021 Nov 1;145(11):1326-1327. Q1 Medical Laboratory Technology (SJR).
  5. Touch DNA recovery from unfired and fired cartridges: Comparison of swabbing, tape lifting and soaking. Prasad E, Hitchcock C, Raymond J, Cole A, Barash M, McNevin D, van Oorschot RAH. Forensic Sci Int. 2021 Nov 10;330: 111101. Q1 Pathology and Forensic Medicine (SJR).
  6. COVID-19 pandemic: lessons learned from more than a century of pandemics and current vaccine development for pandemic control. Buchy P, Buisson Y, Cintra O, Dwyer DE, Nissen M, Ortiz de Lejarazu R, Petersen E. Int J Infect Dis. 2021 Nov; 112:300-317. Q1 Infectious Diseases (SJR).
  7. Assessing the Potential for Patient-led Surveillance After Treatment of Localized Melanoma (MEL-SELF): A Pilot Randomized Clinical Trial. Ackermann DM, Dieng M, Medcalf E, Jenkins MC, van Kemenade CH, Janda M, Turner RM, Cust AE, Morton RL, Irwig L, Guitera P, Soyer HP, Mar V, Hersch JK, Low D, Low C, Saw RPM, Scolyer RA, Drabarek D, Espinoza D, Azzi A, Lilleyman AM, Smit AK, Murchie P, Thompson JF, Bell KJL. JAMA Dermatol. 2021 Nov 24. Q1 Dermatology (SJR).
  8. The utility of SARS-CoV-2-specific serology in COVID-19 diagnosis. Hasan T, Lim HL, Case J, Hueston L, Bag S, Dwyer DE, O'Sullivan MVN. Aust N Z J Public Health. 2021 Nov 11. Q1 Public Health, Environmental and Occupational Health (SJR).
  9. Documenting elimination of co-circulating COVID-19 clusters using genomics in New South Wales, Australia. Arnott A, Draper J, Rockett RJ, Lam C, Sadsad R, Gall M, Martinez E, Byun R, Musto J, Marais B, Chen SC, Kok J, Dwyer DE, Sintchenko V. BMC Res Notes. 2021 Nov 17;14(1):415. Q2 Biochemistry, Genetics and Molecular Biology (miscellaneous (SJR)).
  10. Infection control professionals' and infectious diseases physicians' knowledge, preparedness, and experiences of managing COVID-19 in Australian healthcare settings. Sotomayor-Castillo C, Nahidi S, Li C, Macbeth D, Russo PL, Mitchell BG, Cruickshank M, Sorrell T, Gilroy N, Ferguson P, Watts MR, Shaban RZ. Infect Dis Health. 2021 Nov;26(4):249-257. Q1 Nursing (miscellaneous (SJR)).
  11. The 2021 WHO Classification of Lung Tumors: Impact of advances since 2015. Nicholson AG, Tsao MS, Beasley MB, Borczuk AC, Brambilla E, Cooper WA, Dacic S, Jain D, Kerr KM, Lantuejoul S, Noguchi M, Papotti M, Rekhtman N, Scagliotti G, van Schil P, Sholl L, Yatabe Y, Yoshida A, Travis WD. J Thorac Oncol. 2021 Nov 19: S1556-0864(21)03316-5. Q1 Medicine (miscellaneous (SJR)).
  12. Neutrophil-lymphocyte ratio in acute ischemic stroke: Immunopathology, management, and prognosis. Sharma D, Spring KJ, Bhaskar SMM. Acta Neurol Scand. 2021 Nov;144(5):486-499. Q1 Medicine (miscellaneous (SJR)).
  13. Unravelling Checkpoint Inhibitor Associated Autoimmune Diabetes: From Bench to Bedside. Wu L, Tsang VHM, Sasson SC, Menzies AM, Carlino MS, Brown DA, Clifton-Bligh R, Gunton JE. Front Endocrinol (Lausanne). 2021 Nov 5; 12:764138. Q1 Endocrinology, Diabetes and Metabolism (SJR).
  14. Review of studies of severe acute respiratory syndrome related coronavirus-2 pathogenesis in human organoid models. Egilmezer E, Rawlinson WD. Rev Med Virol. 2021 Nov;31(6): e2227. Q1 Infectious Diseases (SJR).
  15. Clinician perspectives on the factors influencing prognostic stratification by the American Joint Commission on Cancer Head and Neck Cutaneous Squamous Cell Carcinoma Staging. Watts F, Palme CE, Porceddu S, Sundaresan P, Clark JR, Gupta R. Surgery. 2021 Nov;170(5):1467-1473. Q1 Surgery (SJR).
  16. Review and evolution of guidelines for diagnosis of COVID-19 vaccine induced thrombotic thrombocytopenia (VITT). Favaloro EJ, Pasalic L, Lippi G. Clin Chem Lab Med. 2021 Nov 1;60(1):7-17. Q1 Medicine (miscellaneous (SJR)).
  17. Pancreatic solid pseudopapillary neoplasm: a single-institution study. Kotecha K, Pandya A, Gill AJ, Mittal A, Samra J. ANZ J Surg. 2021 Nov;91(11):2453-2458. Q3 Medicine (miscellaneous (SJR)).
  18. Multimodality Treatment Improves Locoregional Control, Progression-Free and Overall Survival in Patients with Anaplastic Thyroid Cancer: A Retrospective Cohort Study Comparing Oncological Outcomes and Morbidity between Multimodality Treatment and Limited Treatment. Jonker PKC, Turchini J, Kruijff S, Lin JF, Gill AJ, Eade T, Aniss A, Clifton-Bligh R, Learoyd D, Robinson B, Tsang V, Glover A, Sidhu S, Sywak M. Ann Surg Oncol. 2021 Nov;28(12):7520-7530. Q1 Oncology (SJR).
  19. Urinary metabolite prognostic biomarker panel for pancreatic ductal adenocarcinomas. Hipperson L, Hadden WJ, Nahm CB, Gill AJ, Samra JS, Dona A, Mittal A, Sahni S. Biochim Biophys Acta Gen Subj. 2021 Nov;1865(11):129966. Q1 Biophysics (SJR).
  20. A practical guide on the use of imiquimod cream to treat lentigo maligna. Guitera P, Waddell A, Paton E, Fogarty GB, Hong A, Scolyer RA, Stretch JR, O'Donnell BA, Pellacani G. Australas J Dermatol. 2021 Nov;62(4):478-485. Q2 Dermatology (SJR).
  21. Medical treatment of polymeric cerebral granulomatous reactions following endovascular procedures. Boyle T, Fernando SL, Steinfort B, Li J, Krause M, Harrington T, Assaad N, Faulder K. J Neurointerv Surg. 2021 Nov;13(11):1032-1036. Q1 Medicine (miscellaneous (SJR)).
  22. An in-field evaluation of rapid DNA instruments for disaster victim identification. Watherston J, Watson J, Bruce D, Ueland M, McNevin D, Ward J. Int J Legal Med. 2021 Nov 24. Q1 Pathology and Forensic Medicine (SJR).
  23. A cluster of lysergic acid diethylamide (LSD) poisonings following insufflation of a white powder sold as cocaine. Roberts DM, Premachandra KH, Chan BS, Auld R, Jiranantakan T, Ewers C, McDonald C, Shaw V, Brown JA. Clin Toxicol (Phila). 2021 Nov;59(11):969-974. Q2 Medicine (miscellaneous (SJR)).
  24. Histological regression in melanoma: impact on sentinel lymph node status and survival. Aivazian K, Ahmed T, El Sharouni MA, Stretch JR, Saw RPM, Spillane AJ, Shannon KF, Ch'ng S, Nieweg OE, Thompson JF, Lo SN, Scolyer RA. Mod Pathol. 2021 Nov;34(11):1999-2008. Q1 Pathology and Forensic Medicine (SJR).
  25. Receptors in host pathogen interactions between human cytomegalovirus and the placenta during congenital infection. Singh K, Hamilton ST, Shand AW, Hannan NJ, Rawlinson WD. Rev Med Virol. 2021 Nov;31(6):e2233. Q1 Infectious Diseases (SJR).
  26. International Medullary Thyroid Carcinoma Grading System: A Validated Grading System for Medullary Thyroid Carcinoma. Xu B, Fuchs TL, Ahmadi S, Alghamdi M, Alzumaili B, Bani MA, Baudin E, Chou A, De Leo A, Fagin JA, Ganly I, Glover A, Hartl D, Kanaan C, Khneisser P, Najdawi F, Nigam A, Papachristos A, Repaci A, Spanheimer PM, Solaroli E, Untch BR, Barletta JA, Tallini G, Al Ghuzlan A, Gill AJ, Ghossein RA. J Clin Oncol. 2021 Nov 3: JCO2101329. Q1 Cancer Research (SJR).
  27. Streamlined three step total vitamin C analysis by HILIC-UV for laboratory testing. Fitzpatrick M, Bonnitcha P, Nguyen VL. Clin Chem Lab Med. 2021 Sep 3;59(12):1944-1949. Q1 Medicine (miscellaneous (SJR)).
  28. Risk-benefit analysis of the AstraZeneca COVID-19 vaccine in Australia using a Bayesian network modelling framework. Lau CL, Mayfield HJ, Sinclair JE, Brown SJ, Waller M, Enjeti AK, Baird A, Short KR, Mengersen K, Litt J. Vaccine. 2021 Nov 4: S0264-410X (21)01428-6. Q1 Immunology and Microbiology (miscellaneous (SJR)).
  29. Stroke Aetiology and Collateral Status in Acute Ischemic Stroke Patients Receiving Reperfusion Therapy-A Meta-Analysis. Sinha A, Stanwell P, Beran RG, Calic Z, Killingsworth MC, Bhaskar SMM. Neurol Int. 2021 Nov 16;13(4):608-621. Q3 Neurology (clinical (SJR)).
  30. Macrophage- and Microglia-Related Chemokines Are Associated with Small Vessel (White Matter) Vascular Dementia: A Case-Control Study. Chen RF, Braidy N, Xu YH, Tan S, Chan DKY. Dement Geriatr Cogn Disord. 2021 Nov 12:1-6. Q2 Cognitive Neuroscience (SJR).
  31. A human rights-based approach to improve access to insulin and other aspects of diabetes care. Brennan F, Williams P, Armstrong K, Klatman E, Donelan N, Ogle GD, Jenkins AJ. Diabetes Res Clin Pract. 2021 Nov 24:109153. Q1 Endocrinology (SJR).
  32. Association between convalescent plasma treatment and mortality in COVID-19: a collaborative systematic review and meta-analysis of randomized clinical trials. Axfors C, Janiaud P, Schmitt AM, Van't Hooft J, Smith ER, Haber NA, Abayomi A, Abduljalil M, Abdulrahman A, Acosta-Ampudia Y, Aguilar-Guisado M, Al-Beidh F, Alejandria MM, et al.BMC Infect Dis. 2021 Nov 20;21(1):1170. Q1 Infectious Diseases (SJR).
  33. Decision support or autonomous artificial intelligence? The case of wrong blood in tube errors. Farrell CL. Clin Chem Lab Med. 2021 Nov 1. Q1 Medicine (miscellaneous (SJR)).
  34. Multi-trait genetic analysis identifies auto-immune loci associated with cutaneous melanoma. Liyanage U, MacGregor S, Bishop DT, Shi J, An J, Ong JS, Han X, Scolyer RA, Martin NG, Medland SE, Byrne EM, Green AC, Saw RPM, Thompson JF, Stretch J, Spillane A, Jiang Y, Tian C; 23andMe Research Team, Gordon SG, Duffy DL, Olsen CM, Whiteman DC, Long GV, Iles MM, Landi MT, Law MH. J Invest Dermatol. 2021 Nov 20: S0022-202X (21)02513-6. Q1 Biochemistry (SJR).
  35. Value of pre-intervention CT perfusion imaging in acute ischemic stroke prognosis. Katyal A, Bhaskar SMM. Diagn Interv Radiol. 2021 Nov;27(6):774-785. Q2 Cardiology and Cardiovascular Medicine (SJR).
  36. EGFR Exon 20 Insertion Mutations: Clinicopathological Characteristics and Treatment Outcomes in Advanced Non-Small Cell Lung Cancer. Leal JL, Alexander M, Itchins M, Wright GM, Kao S, Hughes BGM, Pavlakis N, Clarke S, Gill AJ, Ainsworth H, Solomon B, John T. Clin Lung Cancer. 2021 Nov;22(6): e859-e869. Q1 Oncology (SJR).
  37. Meningococcal Surveillance Australia: Reporting period 1 April to 30 June 2021. Lahra MM, Shoushtari M, Hogan T. Commun Dis Intell (2018). 2021 Nov 30;45.
  38. Diagnostic challenges of focal nodular hyperplasia: interobserver variability, accuracy, and the utility of glutamine synthetase immunohistochemistry. Rowan DJ, Allende DS, Bellizzi AM, Gill RM, Liu X, McKenzie CA, Moreira RK, Mounajjed T, Said S, Westerhoff M, Jenkins SM, Batts KP, Burgart LJ, Lamps LW, Graham RP. Histopathology. 2021 Nov;79(5):791-800. Q1 Histology (SJR).
  39. A Randomized Controlled Trial of Cold Snare Polypectomy Technique: Technique Matters More Than Snare Wire Diameter. Sidhu M, Forbes N, Tate DJ, Desomer L, Lee EYT, Burgess N, van Hattem A, Mcleod D, Cheng E, Cartwright S, Schell A, Hilsden RJ, Heitman SJ, Bourke MJ. Am J Gastroenterol. 2021 Nov 24. Q1 Gastroenterology (SJR).
  40. Multiplexed immunofluorescence identifies high stromal CD68+PD-L1+ macrophages as a predictor of improved survival in triple negative breast cancer. Wang J, Browne L, Slapetova I, Shang F, Lee K, Lynch J, Beretov J, Whan R, Graham PH, Millar EKA. Sci Rep. 2021 Nov 3;11(1):21608. Q1 Multidisciplinary (SJR).
  41. Malignant Peritoneal Mesothelioma With EWSR1-ATF1 Fusion: A Case Report. Ke H, Gill AJ, McKenzie C, Kench JG, Chan RCF, Pavlakis N, Fulham M, Koh C, Kao S. JTO Clin Res Rep. 2021 Oct 11;2(11):100236.
  42. Evaluation of Polarized Light and Fluorescence Microscopy of Congo Red Stain in the Diagnosis of Renal Amyloidosis. Lee AYS, Bayly A, Lin MW. Lab Med. 2021 Nov 2;52(6):574-577. Q3 Biochemistry (medical (SJR)).
  43. Guidance on the critical shortage of sodium citrate coagulation tubes for hemostasis testing. Gosselin RC, Bowyer A, Favaloro EJ, Johnsen JM, Lippi G, Marlar RA, Neeves K, Rollins-Raval MA. J Thromb Haemost. 2021 Nov;19(11): 2857-2861. Q1 Hematology (SJR).
  44. Modelling response strategies for controlling gonorrhoea outbreaks in men who have sex with men in Australia. Duan Q, Carmody C, Donovan B, Guy RJ, Hui BB, Kaldor JM, Lahra MM, Law MG, Lewis DA, Maley M, McGregor S, McNulty A, Selvey C, Templeton DJ, Whiley DM, Regan DG, Wood JG. PLoS Comput Biol. 2021 Nov 4;17(11): e1009385. Q1 Cellular and Molecular Neuroscience (SJR).
  45. Identifying mislabelled samples: Machine learning models exceed human performance. Farrell CJ. Ann Clin Biochem. 2021 Nov;58(6):650-652. Q2 Medicine (miscellaneous (SJR)).
  46. Acute generalized exanthematous pustulosis to a novel oral anticoagulant (apixaban). Fernando SL, Li J, Toon CW, Weir C. Ann Allergy Asthma Immunol. 2021 Nov;127(5):588-589. Q1 Pulmonary and Respiratory Medicine (SJR).
  47. Evaluation of commercially available antibodies and fluorescent conotoxins for the detection of surface ganglionic acetylcholine receptor on the neuroblastoma cell line, IMR-32 by flow cytometry. Urriola N, Lang B, Adelstein S. J Immunol Methods. 2021 Nov; 498:113124. Q3 Immunology (SJR).
  48. Dipeptidyl Peptidase Inhibition Enhances CD8 T Cell Recruitment and Activates Intrahepatic Inflammasome in a Murine Model of Hepatocellular Carcinoma. Henderson JM, Xiang MSW, Huang JC, Wetzel S, Jiang L, Lai JH, Wu W, Kench JG, Bachovchin WW, Roediger B, McCaughan GW, Zhang HE, Gorrell MD. Cancers (Basel). 2021 Nov 1;13(21):5495. Q1 Oncology (SJR).
  49. MCM3 is a novel proliferation marker associated with longer survival for patients with tubo-ovarian high-grade serous carcinoma. Kang EY, Millstein J, Popovic G, Meagher NS, Bolithon A, Talhouk A, Chiu DS, Anglesio MS, Leung B, Tang K, Lambie N, Pavanello M, Da-Anoy A, et al. Virchows Arch. 2021 Nov 15. Q1 Medicine (miscellaneous (SJR)).
  50. Management of a rare cause of upper gastrointestinal bleed: the duodenal gangliocytic paraganglioma. Kotecha K, Paik J, Gill AJ, Samra JS, Mittal A. ANZ J Surg. 2021 Nov;91(11): E724-E726. Q3 Medicine (miscellaneous (SJR)).
  51. First human case of infection with Arsenophonus nasoniae, the male killer insect pathogen. Liew KC, Graves S, Croft L, Brettell LE, Cook J, Botes J, Newton P. Pathology. 2021 Nov 17: S0031-3025(21)00488-8. Q1 Pathology and Forensic Medicine (SJR).
  52. Case report of a challenging medium-sized congenital melanocytic nevus (CMN): Highlighting a role for reflectance confocal microscopy (RCM) for evaluating changing CMN in children. Haefliger S, Guitera P, Melhoranse Gouveia B, Colebatch AJ, Scolyer RA, Rtshiladze M, Martin LK. Pediatr Dermatol. 2021 Nov 4. Q2 Dermatology (SJR).
  53. Relapsed ANCA associated vasculitis following Oxford AstraZeneca ChAdOx1-S COVID-19 vaccination: A case series of two patients. David R, Hanna P, Lee K, Ritchie A. Nephrology (Carlton). 2021 Nov 9. Q2 Medicine (miscellaneous (SJR)).
  54. Correction to: Histological regression in melanoma: impact on sentinel lymph node status and survival. Aivazian K, Ahmed T, El Sharouni MA, Stretch JR, Saw RPM, Spillane AJ, Shannon KF, Ch'ng S, Nieweg OE, Thompson JF, Lo SN, Scolyer RA. Mod Pathol. 2021 Nov;34(11):2091. Q1 Pathology and Forensic Medicine (SJR).
  55. Correction to: Eosinophilic vacuolated tumor (EVT) of kidney demonstrates sporadic TSC/MTOR mutations: next-generation sequencing multi-institutional study of 19 cases. Farcaş M, Gatalica Z, Trpkov K, Swensen J, Zhou M, Alaghehbandan R, Williamson SR, Magi-Galluzzi C, Gill AJ, Tretiakova M, Lopez JI, Montiel DP, Sperga M, Comperat E, Brimo F, Yilmaz A, Siadat F, Sangoi A, Gao Y, Ptákova N, Kuthi L, Pivovarcikova K, Rogala J, Agaimy A, Hartmann A, Fraune C, Rychly B, Hurnik P, Durcansky D, Bonert M, Gakis G, Michal M, Hora M, Hes O. Mod Pathol. 2021 Nov 2. Q1 Pathology and Forensic Medicine (SJR).

 

OCTOBER 2021

  1. Why Choose a Pathology Career? Fielder T, Watts F, Howden C, Gupta R, McKenzie C. Arch Pathol Lab Med. 2021 Oct 12. Q1 Medical Laboratory Technology (SJR).
  2. COVID-19 in children: I. Epidemiology, prevention and indirect impacts. Howard-Jones AR, Bowen AC, Danchin M, Koirala A, Sharma K, Yeoh DK, Burgner DP, Crawford NW, Goeman E, Gray PE, Hsu P, Kuek S, McMullan BJ, Tosif S, Wurzel D, Britton PN. J Paediatr Child Health. 2021 Oct 13. Q2 Peadiatrics, Perinatology and Child Health (SJR).
  3. COVID-19 in children. II: Pathogenesis, disease spectrum and management. Howard-Jones AR, Burgner DP, Crawford NW, Goeman E, Gray PE, Hsu P, Kuek S, McMullan BJ, Tosif S, Wurzel D, Bowen AC, Danchin M, Koirala A, Sharma K, Yeoh DK, Britton PN. J Paediatr Child Health. 2021 Oct 25. Q2 Peadiatrics, Perinatology and Child Health (SJR).
  4. High-Dimensional Single-Cell Transcriptomics in Melanoma and Cancer Immunotherapy. Quek C, Bai X, Long GV, Scolyer RA, Wilmott JS. Genes (Basel). 2021 Oct 16;12(10):1629. Q2 Genetics (SJR).
  5. Intensive surveillance, rapid response and border collaboration for malaria elimination: China Yunnan's ''3 + 1''strategy. Xu JW, Lin ZR, Zhou YW, Lee R, Shen HM, Sun XD, Chen QY, Duan KX, Tian P, Ding CL, Xu SY, Liu H, Zhou HN. Malar J. 2021 Oct 9;20(1):396. Q1 Infectious Diseases (SJR).
  6. Setting analytical performance specifications using HbA1c as a model measurand. Ping Loh T, Smith AF, Jl Bell K, Lord SJ, Ceriotti F, Jones G, Bossuyt P, Sandberg S, Rita Horvath A; European Federation of Clinical Chemistry, Laboratory Medicine Task Group on Outcome-based Analytical Performance Specifications. Clin Chim Acta. 2021 Oct 16: S0009-8981(21)00360-0. Q2 Biochemistry (SJR).
  7. Predictive Performance of Bayesian Vancomycin Monitoring in the Critically Ill. Narayan SW, Thoma Y, Drennan PG, Yejin Kim H, Alffenaar JW, Van Hal S, Patanwala AE. Crit Care Med. 2021 Oct 1;49(10): e952-e960. Q1 Critical Care and Intensive Care Medicine (SJR).
  8. Survival Outcomes of Salvage Metastasectomy After Failure of Modern-Era Systemic Therapy for Melanoma. Li AT, Vakharia K, Lo SN, Varey AHR, Carlino MS, Saw RPM, Shannon KF, Howle JR, Pennington TE, Stretch JR, Nieweg OE, Spillane AJ, Long GV, Menzies AM, Scolyer RA, Thompson JF, Ch'ng S. Ann Surg Oncol. 2021 Oct;28(11):6109-6123. Q1 Oncology (SJR).
  9. Not all melanomas are created equal: a review and call for more research into nodular melanoma. Dessinioti C, Geller AC, Whiteman DC, Garbe C, Grob JJ, Kelly JW, Scolyer RA, Rawson RV, Lallas A, Pellacani G, Stratigos AJ. Br J Dermatol. 2021 Oct;185(4):700-710. Q1 Dermatology (SJR).
  10. A single-cell tumor immune atlas for precision oncology. Nieto P, Elosua-Bayes M, Trincado JL, Marchese D, Massoni-Badosa R, Salvany M, Henriques A, Nieto J, Aguilar-Fernández S, Mereu E, Moutinho C, Ruiz S, Lorden P, Chin VT, Kaczorowski D, Chan CL, Gallagher R, Chou A, Planas-Rigol E, Rubio-Perez C, Gut I, Piulats JM, Seoane J, Powell JE, Batlle E, Heyn H. Genome Res. 2021 Oct;31(10):1913-1926. Q1 Genetics (SJR).
  11. A Portable RT-LAMP/CRISPR Machine for Rapid COVID-19 Screening. Rezaei M, Razavi Bazaz S, Morshedi Rad D, Shimoni O, Jin D, Rawlinson W, Ebrahimi Warkiani M. Biosensors (Basel). 2021 Oct 2;11(10):369. Q2 Clinical Biochemistry (SJR).
  12. Australian Gonococcal Surveillance Programme Annual Report, 2020. Lahra MM, Hogan TR, Shoushtari M, Armstrong BH. Commun Dis Intell (2018). 2021 Oct 28;45.
  13. Review and evolution of guidelines for diagnosis of COVID-19 vaccine induced thrombotic thrombocytopenia (VITT). Favaloro EJ, Pasalic L, Lippi G. Clin Chem Lab Med. 2021 Oct 29. Q1 Medicine (miscellaneous (SJR)).
  14. Gastrointestinal: Autoimmune enteropathy associated with thymoma. Gu B, Liu K, McKenzie C, MacGregor D, Corte C. J Gastroenterol Hepatol. 2021 Oct 10. Q1 Gastroenterology (SJR).
  15. THOC2 and THOC5 Regulate Stemness and Radioresistance in Triple-Negative Breast Cancer. Bai X, Ni J, Beretov J, Wang S, Dong X, Graham P, Li Y. Adv Sci (Weinh). 2021 Oct 27: e2102658. Q1 Biochemistry, Genetics and Molecular Biology (miscellaneous (SJR)).
  16. In-hospital systems interventions in acute stroke reperfusion therapy: a meta-analysis. Baskar PS, Chowdhury SZ, Bhaskar SMM. Acta Neurol Scand. 2021 Oct;144(4):418-432. Q1 Medicine (miscellaneous (SJR)).
  17. Australian Paediatric Surveillance Unit (APSU) Annual Surveillance Report 2020. Teutsch SM, Nunez CA, Morris A, Eslick GD, Khandaker G, Berkhout A, Novakovic D, Brotherton JML, McGregor S, King J, Egilmezer E, Booy R, Jones CA, Rawlinson W, Thorley BR, Elliott EJ. Commun Dis Intell (2018). 2021 Oct 28;45.
  18. Seroprevalence of hepatitis B antibodies among international and domestic university students. Heywood A, Dyda A, Hu W, Saha A, Mahimbo A, Gidding H, Kefalas B, Seale H, Macintyre CR, Zwar N, Rawlinson W. J Viral Hepat. 2021 Oct;28(10):1400-1412. Q1 Infectious Diseases (SJR).
  19. Cerebral Venous Thrombosis Developing after COVID-19 Vaccination: VITT, VATT, TTS, and More. Lippi G, Favaloro EJ. Semin Thromb Hemost. 2021 Oct 25. Q1 Cardiology and Cardiovascular Medicine (SJR).
  20. Clinical suspicion of pancreatic cancer despite negative endoscopic ultrasound-guided fine-needle aspiration biopsy. Masuda H, Kotecha K, Maitra R, Gill AJ, Mittal A, Samra JS. ANZ J Surg. 2021 Oct 11. Q3 Medicine (miscellaneous (SJR)).
  21. Economic evaluation of reproductive carrier screening for recessive genetic conditions: a systematic review. Wang T, Bahrampour M, Byrnes J, Scuffham P, Kirk E, Downes M. Expert Rev Pharmacoecon Outcomes Res. 2021 Oct 26:1-10. Q2 Health Policy (SJR).
  22. Phage therapy in pediatrics: the way forward for difficult-to-treat infections? Howard-Jones AR, Iredell JR, Khatami A. Expert Rev Anti Infect Ther. 2021 Oct 15:1-5. Q2 Infectious Diseases (SJR).
  23. Clinical characteristics and outcomes of COVID-19 in a low-prevalence, well resourced setting, Sydney, Australia. Shiel E, Miyakis S, Tennant E, Fernando S, Kizny-Gordon A, Koh B, Findlay M, Garnham K, Pilli S, Segboer H, Tallon J, Kao J, Miller A, Shore T, Maher R, Telford M, Barclay K, Harris B, Newcombe J, Hudson B, Figtree M. Intern Med J. 2021 Oct;51(10):1605-1613. Q3 Internal Medicine (SJR).
  24. Survival in borderline resectable and locally advanced pancreatic cancer is determined by the duration and response of neoadjuvant therapy. Wijetunga AR, Chua TC, Nahm CB, Pavlakis N, Clarke S, Chan DL, Diakos C, Maloney S, Ashrafi-Zadeh A, Kneebone A, Hruby G, Jamieson NB, Gill A, Mittal A, Samra JS. Eur J Surg Oncol. 2021 Oct;47(10):2543-2550. Q1 Medicine (miscellaneous (SJR)).
  25. Exome sequencing of familial adenomatous polyposis-like individuals identifies both known and novel causative genes. Xavier A, Scott RJ, Talseth-Palmer B. Clin Genet. 2021 Oct;100(4):478-483. Q1 Genetics (SJR).
  26. SARS-CoV-2 Genome Sequencing Methods Differ in Their Abilities To Detect Variants from Low-Viral-Load Samples. Lam C, Gray K, Gall M, Sadsad R, Arnott A, Johnson-Mackinnon J, Fong W, Basile K, Kok J, Dwyer DE, Sintchenko V, Rockett RJ. J Clin Microbiol. 2021 Oct 19;59(11): e0104621. Q1 Microbiology (medical (SJR)).
  27. Overcoming enzalutamide resistance in metastatic prostate cancer by targeting sphingosine kinase. Lin HM, Mak B, Yeung N, Huynh K, Meikle TG, Mellett NA, Kwan EM, Fettke H, Tran B, Davis ID, Mahon KL, Zhang A, Stockler MR, Briscoe K, Marx G, Crumbaker M, Stricker PD, Du P, Yu J, Jia S, Scheinberg T, Fitzpatrick M, Bonnitcha P, Sullivan DR, Joshua AM, Azad AA, Butler LM, Meikle PJ, Horvath LG. EBioMedicine. 2021 Oct;72: 103625. Q1 Biochemistry, Genetics and Molecular Biology (miscellaneous (SJR)).
  28. Emergence of de novo cutaneous vasculitis post coronavirus disease (COVID-19) vaccination. Liang I, Swaminathan S, Lee AYS. Clin Rheumatol. 2021 Oct 2:1-2. Q2 Medicine (miscellaneous (SJR)).
  29. Diagnosis of myositis-associated interstitial lung disease: Utility of the myositis autoantibody line immunoassay. Jee AS, Parker MJS, Bleasel JF, Troy LK, Lau EM, Jo HE, Teoh AKY, Webster S, Adelstein S, Corte TJ. Respir Med. 2021 Oct;187: 106581. Q1 Pulmonary and Respiratory Medicine (SJR).
  30. Combined presentation and immunogenicity analysis reveals a recurrent RAS.Q61K neoantigen in melanoma. Peri A, Greenstein E, Alon M, Pai JA, Dingjan T, Reich-Zeliger S, Barnea E, Barbolin C, Levy R, Arnedo-Pac C, Kalaora S, Dassa B, Feldmesser E, Shang P, Greenberg P, Levin Y, Benedek G, Levesque MP, Adams DJ, Lotem M, Wilmott JS, Scolyer RA, Jönsson GB, Admon A, Rosenberg SA, Cohen CJ, Niv MY, Lopez-Bigas N, Satpathy AT, Friedman N, Samuels Y. J Clin Invest. 2021 Oct 15;131(20): e129466. Q1 Medicine (miscellaneous (SJR)).
  31. A vanA vancomycin-resistant Enterococcus faecium ST80 outbreak resulting from a single importation event. Pratama R, Beukers AG, McIver CJ, Keighley CL, Taylor PC, van Hal SJ. J Antimicrob Chemother. 2021 Oct 29: dkab379. Q1 Infectious Diseases (SJR).
  32. Validation of a Flow Cytometry Live Cell-Based Assay to Detect Myelin Oligodendrocyte Glycoprotein Antibodies for Clinical Diagnostics. Lopez JA, Houston SD, Tea F, Merheb V, Lee FXZ, Smith S, McDonald D, Zou A, Liyanage G, Pilli D, Denkova M, Lechner-Scott J, van der Walt A, Barnett MH, Reddel SW, Broadley S, Ramanathan S, Dale RC, Brown DA, Brilot F. J Appl Lab Med. 2021 Oct 30: jfab101.
  33. Cryptococcus gattii Species Complex as an Opportunistic Pathogen: Underlying Medical Conditions Associated with the Infection. Yang DH, England MR, Salvator H, Anjum S, Park YD, Marr KA, Chu LA, Govender NP, Lockhart SR, Desnos-Ollivier M, Chen S, Halliday C, Kan A, Chen J, Wollenberg KR, Zelazny A, Perfect JR, Chang YC, Bennett JE, Holland SM, Meyer W, Williamson PR, Kwon-Chung KJ. mBio. 2021 Oct 26;12(5): e0270821. Q1 Microbiology (SJR).
  34. Multiple Mechanisms Conferring Broad-Spectrum Insecticide Resistance in the Tropical Bed Bug (Hemiptera: Cimicidae). Dang K, Doggett SL, Leong XY, Veera Singham G, Lee CY. J Econ Entomol. 2021 Oct 25: toab205. Q1 Insect Science (SJR).
  35. Dynamics of Epstein-Barr virus on post-transplant lymphoproliferative disorders after antithymocyte globulin-conditioned allogeneic hematopoietic cell transplant. Lindsay J, Othman J, Yong MK, Ritchie D, Chee L, Tay K, Tio SY, Kerridge I, Fay K, Stevenson W, Arthur C, Chen SC, Kong DCM, Greenwood M, Pergam SA, Liu C, Slavin MA. Transpl Infect Dis. 2021 Oct;23(5): e13719. Q2 Transplantation (SJR).
  36. Lipidomic Profiling of Clinical Prostate Cancer Reveals Targetable Alterations in Membrane Lipid Composition. Butler LM, Mah CY, Machiels J, Vincent AD, Irani S, Mutuku SM, Spotbeen X, Bagadi M, Waltregny D, Moldovan M, Dehairs J, Vanderhoydonc F, Bloch K, Das R, Stahl J, Kench JG, Gevaert T, Derua R, Waelkens E, Nassar ZD, Selth LA, Trim PJ, Snel MF, Lynn DJ, Tilley WD, Horvath LG, Centenera MM, Swinnen JV. Cancer Res. 2021 Oct 1;81(19):4981-4993. Q1 Cancer Research (SJR).
  37. A Practical, One-Clinic Visit Protocol for Pharmacokinetic Profile Generation with the ADVATE myPKFiT Dosing Tool in Severe Hemophilia A Subjects. Blanchette VS, Zunino L, Grassmann V, Barnes C, Carcao MD, Curtin J, Jackson S, Khoo L, Komrska V, Lillicrap D, Morfini M, Romanova G, Stephens D, Zapotocka E, Rand ML, Blatny J. Thromb Haemost. 2021 Oct;121(10):1326-1336. Q1 Hematology (SJR).
  38. NKX3.1 immunohistochemistry is highly specific for the diagnosis of mesenchymal chondrosarcomas: experience in the Australian population. Ramanayake N, Vargas AC, Talbot J, Bonar F, Wong DD, Wong D, Mahar A, Karim R, Luk PP, Selinger C, Sioson L, Gill AJ, Maclean F. Pathology. 2021 Oct;53(6):705-712. Q1 Pathology and Forensic Medicine (SJR).
  39. "No Country Bureaucratised its way to Excellence": A Content Analysis of Comments on a Petition to Streamline Australian Research Ethics and Governance Processes. Scott AM, Bryant EA, Byrne JA, Taylor N, Barnett AG. J Empir Res Hum Res Ethics. 2021 Oct 12:15562646211048268. Q1 Communication (SJR).
  40. Elevated soluble urokinase plasminogen activator receptor (suPAR) in COVID-19 patients. Lippi G, Henry BM, Favaloro EJ. Clin Chem Lab Med. 2021 Jun 14;59(11): e413-e415. Q1 Medicine (miscellaneous (SJR)).
  41. Complex melanoma of the scalp: Diagnosis and management aided by confocal microscopy. Regio Pereira A, Guitera P, Ferguson PM, Ch'ng S, Hirata S. Australas J Dermatol. 2021 Oct 26. Q2 Dermatology (SJR).
  42. The kinetic estimated glomerular filtration rate ratio predicts acute kidney injury. Christiadi D, Erlich J, Levy M, Herath S, Qian J, Boardman S, Campbell C, Kotwal S, Horvath AR, Endre Z. Nephrology (Carlton). 2021 Oct;26(10):782-789. Q2 Medicine (miscellaneous (SJR)).
  43. Autosomal dominant ADAR c.3019G>A (p.(G1007R)) variant is an important mimic of hereditary spastic paraplegia and cerebral palsy. Jones HF, Stoll M, Ho G, O'Neill D, Han VX, Paget S, Stewart K, Lewis J, Kothur K, Troedson C, Crow YJ, Dale RC, Mohammad SS. Brain Dev. 2021 Oct 23: S0387-7604(21)00185-6. Q2 Medicine (miscellaneous (SJR)).
  44. Rare germline variants in childhood cancer patients suspected of genetic predisposition to cancer. Sylvester DE, Chen Y, Grima N, Saletta F, Padhye B, Bennetts B, Wright D, Krivanek M, Graf N, Zhou L, Catchpoole D, Kirk J, Latchoumanin O, Qiao L, Ballinger M, Thomas D, Jamieson R, Dalla-Pozza L, Byrne JA. Genes Chromosomes Cancer. 2021 Oct 23. Q1 Genetics (SJR).
  45. The role of lipoprotein(a) in coronavirus disease 2019 (COVID-19) with relation to development of severe acute kidney injury. Lippi G, Szergyuk I, de Oliveira MHS, Benoit SW, Benoit JL, Favaloro EJ, Henry BM. J Thromb Thrombolysis. 2021 Oct 28:1-5. Q2 Cardiology and Cardiovascular Medicine (SJR).
  46. Levels of haemolysis have no effect on femoral vein post-mortem tryptase levels. Garland J, Ondruschka B, Broi UD, Palmiere C, Glenn C, Morrow P, Kesha K, Stables S, Tse R. Med Sci Law. 2021 Oct;61(4):250-255. Q2 Law (SJR).
  47. Investigation of product-derived lymphoma following infusion of piggyBac-modified CD19 chimeric antigen receptor T cells. Micklethwaite KP, Gowrishankar K, Gloss BS, Li Z, Street JA, Moezzi L, Mach MA, Sutrave G, Clancy LE, Bishop DC, Louie RHY, Cai C, Foox J, MacKay M, Sedlazeck FJ, Blombery P, Mason CE, Luciani F, Gottlieb DJ, Blyth E. Blood. 2021 Oct 21;138(16):1391-1405. Q1 Biochemistry (SJR).
  48. Corrigendum: Serum Biomarker Panel for Diagnosis and Prognosis of Pancreatic Ductal Adenocarcinomas. Mehta S, Bhimani N, Gill AJ, Samra JS, Sahni S, Mittal A. Front Oncol. 2021 Oct 6;11: 774861. Q1 Oncology (SJR).
  49. In-hospital prevalence of mucormycosis among coronavirus disease 2019 (COVID-19) patients and COVID-19 in mucormycosis: a systematic review and meta-analysis. Sinha A, Bhaskar SMM. Int Forum Allergy Rhinol. 2021 Oct 11. Q1 Otorhinolaryngology (SJR)
  50. A case report of successful transition from argatroban to warfarin using DOAC-stop in heparin induced thrombocytopenia (HIT). Makhija K, Chapman K, Prasad R. Pathology. 2021 Oct;53(6):800-802. Q1 Pathology and Forensic Medicine (SJR).
  51. Development of CAR T-cell lymphoma in 2 of 10 patients effectively treated with piggyBac-modified CD19 CAR T cells. Bishop DC, Clancy LE, Simms R, Burgess J, Mathew G, Moezzi L, Street JA, Sutrave G, Atkins E, McGuire HM, Gloss BS, Lee K, Jiang W, Maddock K, McCaughan G, Avdic S, Antonenas V, O'Brien TA, Shaw PJ, Irving DO, Gottlieb DJ, Blyth E, Micklethwaite KP. Blood. 2021 Oct 21;138(16):1504-1509. Q1 Biochemistry (SJR).
  52. A rare case of high grade myxoinflammatory fibroblastic sarcoma of the neck with PRAME immuno-expression: a potential pitfall. Pulvers JN, Roberts ST, Wignall A, Chan RCF, Muljono A, Toon CW. Pathology. 2021 Oct 25: S0031-3025(21)00479-7. Q1 Pathology and Forensic Medicine (SJR).
  53. Intravital imaging technology guides FAK-mediated priming in pancreatic cancer precision medicine according to Merlin status. Murphy KJ, Reed DA, Vennin C, Conway JRW, Nobis M, Yin JX, Chambers CR, Pereira BA, Lee V, Filipe EC, Trpceski M, Ritchie S, Lucas MC, Warren SC, Skhinas JN, Magenau A, Metcalf XL, Stoehr J, Major G, Parkin A, Bidanel R, Lyons RJ, Zaratzian A, Tayao M, Da Silva A, Abdulkhalek L; Australian Pancreatic Genome Initiative (APGI); Australian Pancreatic Cancer Matrix Atlas (APMA), Gill AJ, Johns AL, Biankin AV, Samra J, Grimmond SM, Chou A, Goetz JG, Samuel MS, Lyons JG, Burgess A, Caldon CE, Horvath LG, Daly RJ, Gadegaard N, Wang Y, Sansom OJ, Morton JP, Cox TR, Pajic M, Herrmann D, Timpson P. Sci Adv. 2021 Oct;7(40): eabh0363. Q1 Multidisciplinary (SJR).
  54. Catastrophic chemotherapy toxicity leading to diagnosis of Fanconi anaemia due to FANCD1/BRCA2 during adulthood: description of an emerging phenotype. Ip E, McNeil C, Grimison P, Scheinberg T, Tudini E, Ho G, Scott RJ, Brown C, Sandroussi C, Guitera P, Spurdle AB, Goodwin A. J Med Genet. 2021 Oct 25:jmedgenet-2021-108072. Q1 Genetics (SJR).
  55. Correction to: Eosinophilic vacuolated tumor (EVT) of kidney demonstrates sporadic TSC/MTOR mutations: next-generation sequencing multi-institutional study of 19 cases. Farcaş M, Gatalica Z, Trpkov K, Swensen J, Zhou M, Alaghehbandan R, Williamson SR, Magi-Galluzzi C, Gill AJ, Tretiakova M, Lopez JI, Montiel DP, Sperga M, Comperat E, Brimo F, Yilmaz A, Siadat F, Sangoi A, Gao Y, Ptákova N, Kuthi L, Pivovarcikova K, Rogala J, Agaimy A, Hartmann A, Fraune C, Rychly B, Hurnik P, Durcansky D, Bonnert M, Gakis G, Michal M, Hora M, Hes O. Mod Pathol. 2021 Oct 5. Q1 Pathology and Forensic Medicine

 

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