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New Publications (October - November 2019)

In the months of October-November 2019 we published 34 publications that are listed on PubMed using “NSW Health Pathology” as a search term.

Make your publication count by using NSWHP’s Research Publication Affiliation and Acknowledgement Policy.

This policy defines the requirements for NSW Health Pathology employees, students and other
external research colleagues to acknowledge the support provided by NSW Health Pathology in
completing research and research-related activities, including clinical trials.

All NSW Health Pathology author affiliations must include the following elements in
the following order:

a) “NSW Health Pathology”
b) The name of the clinical service or specialty
c) Location of the service or specialty
d) City and state
e) Any additional partnership affiliations (where applicable).
For example:
1 NSW Health Pathology, Microbiology, Westmead Hospital, Westmead, NSW. Institute of Clinical Pathology and Medical Research

 

Research Publications

 

NOVEMBER

  1. Long-read sequencing based clinical metagenomics for the detection and confirmation of Pneumocystis jirovecii directly from clinical specimens: A paradigm shift in mycological diagnostics. Irinyi L, Hu Y, Hoang MTV, Pasic L, Halliday C, Jayawardena M, Basu I, McKinney W, Morris AJ, Rathjen J, Stone E, Chen S, Sorrell TC, Schwessinger B, Meyer W. Med Mycol. 2019 Nov 23.

     

  2. Melanoma pathology reporting and staging. Scolyer RA, Rawson RV, Gershenwald JE, Ferguson PM, Prieto VG. Mod Pathol. 2019 Nov 22.

     

  3. The Pointy End of Point-of-Care Testing for Direct Oral Anticoagulants. Favaloro EJ, Lippi G. Thromb Haemost. 2019 Nov 21.

     

  4. Assessment of Tumor-infiltrating Lymphocytes Using International TILs Working Group (ITWG) System Is a Strong Predictor of Overall Survival in Colorectal Carcinoma: A Study of 1034 Patients. Fuchs TL, Sioson L, Sheen A, Jafari-Nejad K, Renaud CJ, Andrici J, Ahadi M, Chou A, Gill AJ. Am J Surg Pathol. 2019 Nov 14.

     

  5. Australian Paediatric Surveillance Unit Annual Report 2018. Nunez CA, Morris A, Teutsch SM, McGregor S, Brotherton J, Novakovic D, Rawlinson W, Jones CA, Thorley BR, Elliott EJ. Commun Dis Intell (2018). 2019 Nov 18;43.

     

  6. Influenza epidemiology in patients admitted to sentinel Australian hospitals in 2018: the Influenza Complications Alert Network (FluCAN). Cheng AC, Holmes M, Dwyer DE, Senanayake S, Cooley L, Irving LB, Simpson G, Korman T, Macartney K, Friedman ND, Wark P, Howell A, Blyth CC, Crawford N, Buttery J, Bowler S, Upham JW, Waterer GW, Kotsimbos T, Kelly PM. Commun Dis Intell (2018). 2019 Nov 18;43.

     

  7. Wnt receptor gene FZD1 was associated with schizophrenia in genome-wide SNP analysis of the Australian Schizophrenia Research Bank cohort. Liu X, Low SK, Atkins JR, Wu JQ, Reay WR, Cairns HM, Green MJ, Schall U, Jablensky A, Mowry B, Michie PT, Catts SV, Henskens F, Pantelis C, Loughland C, Boddy AV, Tooney PA, Scott RJ, Carr VJ, Cairns MJ. Aust N Z J Psychiatry. 2019 Nov 16:4867419885443.

     

  8. Comparison of several immunoassays used in drugs of abuse screening: Assessment against gold standard methods and calculation of measurement uncertainty. Mina A. J Pharmacol Toxicol Methods. 2019 Nov 12:106649.

     

  9. Measles. Rawlinson WD, Palasanthiran P. N Engl J Med. 2019 Nov 14;381(20):1978-1979.

     

  10. Who Gets a Laboratory Test in Hospital, Why, and How Often? A Retrospective Observational Study of 4 Australian Hospitals. Georgiou A, Sezgin G, Li L, Wilson R, McCaughey EJ, Lindeman R, Vecellio E, Westbrook JI. J Appl Lab Med. 2019 Nov;4(3):343-354.

     

  11. Cancer stem cells in prostate cancer radioresistance. Tsao T, Beretov J, Ni J, Bai X, Bucci J, Graham P, Li Y. Cancer Lett. 2019 Nov 28;465:94-104.

     

  12. Residual risk of infection with blood-borne viruses in potential organ donors at increased risk of infection: systematic review and meta-analysis. Waller KM, De La Mata NL, Kelly PJ, Ramachandran V, Rawlinson WD, Wyburn KR, Webster AC. Med J Aust. 2019 Nov;211(9):414-420.

     

  13. Cobalt accumulation in horses following repeated administration of cobalt chloride. Wenzel RG, Major D, Hesp KF, Hall E, Doble P. Aust Vet J. 2019 Nov;97(11):465-472.

     

  14. The Russell viper venom time (RVVT) test for investigation of lupus anticoagulant (LA). Favaloro EJ. Am J Hematol. 2019 Nov;94(11):1290-1296.

     

  15. Statins for Preventing Venous Thrombosis: For or Against? Lippi G, Favaloro EJ. Semin Thromb Hemost. 2019 Nov;45(8):834-836.

     

  16. Bird mite infestation masquerading as allergic dermatitis. Nagaratnam N, Nagaratnam N, Geary MJ. Australas J Dermatol. 2019 Nov;60(4):322-323.

     

  17. Measurement of High-Sensitivity Cardiac Troponin in Pulmonary Embolism: Useful Test or a Clinical Distraction. Lippi G, Favaloro EJ, Kavsak P. Semin Thromb Hemost. 2019 Nov;45(8):784-792.

 

OCTOBER

  1. Human pegivirus in brain tissue of a patient with encephalitis. Tuddenham R, Eden JS, Gilbey T, Dwyer DE, Jennings Z, Holmes EC, Branley JM. Diagn Microbiol Infect Dis. 2019 Oct 5:114898.

     

  2. Targeting Apoptotic Pathways in Acute Myeloid Leukaemia. Sillar JR, Enjeti AK. Cancers (Basel). 2019 Oct 26;11(11).

     

  3. Coagulation mixing studies: Utility, algorithmic strategies and limitations for lupus anticoagulant testing or follow up of abnormal coagulation tests. Favaloro EJ. Am J Hematol. 2019 Oct 31.

     

  4. International Council for Standardization in Haematology Recommendations for Hemostasis Critical Values, Tests, and Reporting. Gosselin RC, Adcock D, Dorgalaleh A, Favaloro EJ, Lippi G, Pego JM, Regan I, Siguret V. Semin Thromb Hemost. 2019 Oct 22.

     

     

  5. TAPES: A tool for assessment and prioritisation in exome studies. Xavier A, Scott RJ, Talseth-Palmer BA. PLoS Comput Biol. 2019 Oct 15;15(10):e1007453.

     

  6. Global epidemiology of nonpolio enteroviruses causing severe neurological complications: A systematic review and meta-analysis. Suresh S, Rawlinson WD, Andrews PI, Stelzer-Braid S. Rev Med Virol. 2019 Oct 6:e2082.

     

  7. Is secretory breast carcinoma underdiagnosed? In the era of targeted therapy should there be a low threshold to screen for NTRK immunohistochemistry in triple negative breast cancers? Zaborowski M, Gill AJ. Pathology. 2019 Oct;51(6):653-655.

     

  8. Early-life factors contributing to type 1 diabetes. Craig ME, Kim KW, Isaacs SR, Penno MA, Hamilton-Williams EE, Couper JJ, Rawlinson WD. Diabetologia. 2019 Oct;62(10):1823-1834.

     

  9. Evaluating the associations between obesity and age-related cataract: a Mendelian randomization study. Tan AG, Kifley A, Flood VM, Holliday EG, Scott RJ, Cumming RG, Mitchell P, Wang JJ. Am J Clin Nutr. 2019 Oct 1;110(4):969-976.

     

  10. Genetic Testing for Thrombophilia-Related Genes: Observations of Testing Patterns for Factor V Leiden (G1691A) and Prothrombin Gene "Mutation" (G20210A). Favaloro EJ. Semin Thromb Hemost. 2019 Oct;45(7):730-742.

     

  11. Bioactive compounds sourced from Terminalia spp. in bacterial malodour prevention: an effective alternative to chemical additives. Cock IE, Wright MH, Matthews B, White A. Int J Cosmet Sci. 2019 Oct;41(5):496-508.

     

  12. Clinical use of SNP-microarrays for the detection of genome-wide changes in haematological malignancies. Berry NK, Scott RJ, Rowlings P, Enjeti AK. Crit Rev Oncol Hematol. 2019 Oct;142:58-67.

     

  13. Development and implementation of an expert rule set for automated reflex testing and validation of routine coagulation tests in a large pathology network. Mohammed S, Ule Priebbenow V, Pasalic L, Favaloro EJ. Int J Lab Hematol. 2019 Oct;41(5):642-649.

     

  14. Transcatheter microwave ablation can deliver deep and circumferential perivascular nerve injury without significant arterial injury to provide effective renal denervation. Qian PC, Barry MA, Lu J, Al-Raisi S, Mina A, Ryan J, Bandodkar S, Alvarez S, James V, Ronquillo J, Varikatt W, Clayton Z, Chong J, Kovoor P, Pouliopoulos J, McEwan A, Thiagalingam A, Thomas SP. J Hypertens. 2019 Oct;37(10):2083-2092.

     

  15. Influence of hypertriglyceridemia, hyperbilirubinemia and hemolysis on thrombin generation in human plasma. Salvagno GL, Favaloro EJ, Demonte D, Gelati M, Poli G, Targher G, Lippi G. Clin Chem Lab Med. 2019 Oct 25;57(11):1784-1789.

     

  16. Fatal Exsanguination Following Rupture of an Iliac Artery Aneurysm in an Infant with Menkes Disease. Ng R, Eliezer D, Vilain R, Kamien B, Deshpande AV. Pediatr Dev Pathol. 2019 Oct;22(5):486-491.

     

  17. Identification of multiple species and subpopulations among Australian clinical Sporothrix isolates using whole genome sequencing. New D, Beukers AG, Kidd SE, Merritt AJ, Weeks K, van Hal SJ, Arthur I. Med Mycol. 2019 Oct 1;57(7):905-908.

 

Research Publications Archive

 

SEPTEMBER

  1. Platelet Transfusion Thresholds: How Low Can We Go in Respect to Platelet Counting? Lippi G, Favaloro EJ, Buoro S. Semin Thromb Hemost. 2019 Sep 28.

     

  2. Drug-Induced Thrombocytopenia: Mechanisms and Laboratory Diagnostics. Danese E, Montagnana M, Favaloro EJ, Lippi G. Semin Thromb Hemost. 2019 Sep 28.

     

  3. RET gene rearrangements occur in a subset of pancreatic acinar cell carcinomas. Chou A, Brown IS, Kumarasinghe MP, Perren A, Riley D, Kim Y, Pajic M, Steinmann A, Rathi V, Jamieson NB, Verheij J, van Roessel S, Nahm CB, Mittal A, Samra J, Gill AJ. Mod Pathol. 2019 Sep 26.

     

  4. A Clinicopathologic and Molecular Analysis of Fumarate Hydratase-Deficient Renal Cell Carcinoma in 32 Patients. Lau HD, Chan E, Fan AC, Kunder CA, Williamson SR, Zhou M, Idrees MT, Maclean FM, Gill AJ, Kao CS. Am J Surg Pathol. 2019 Sep 12.

     

  5. Cutaneous manifestation of IgG4-related disease mimicking dermatitis artefacta. Ashoka Menon V, Tong E, Slape DRL, Phan TA, Chan RC. Australas J Dermatol. 2019 Sep 11.

     

  6. Suggested clinical approach for the diagnosis and management of 'statin intolerance' with an emphasis on muscle-related side-effects. Sivashanmugarajah A, Fulcher J, Sullivan D, Elam M, Jenkins A, Keech A. Intern Med J. 2019 Sep;49(9):1081-1091.

     

  7. The molecular origin and taxonomy of mucinous ovarian carcinoma. Cheasley D, Wakefield MJ, Ryland GL, Allan PE, Alsop K, Amarasinghe KC, Ananda S, Anglesio MS, Au-Yeung G, Böhm M, Bowtell DDL, Brand A, Chenevix-Trench G, Christie M, Chiew YE, Churchman M, DeFazio A, Demeo R, Dudley R, Fairweather N, Fedele CG, Fereday S, Fox SB, Gilks CB, Gourley C, Hacker NF, Hadley AM, Hendley J, Ho GY, Hughes S, Hunstman DG, Hunter SM, Jobling TW, Kalli KR, Kaufmann SH, Kennedy CJ, Köbel M, Le Page C, Li J, Lupat R, McNally OM, McAlpine JN, Mes-Masson AM, Mileshkin L, Provencher DM, Pyman J, Rahimi K, Rowley SM, Salazar C, Samimi G, Saunders H, Semple T, Sharma R, Sharpe AJ, Stephens AN, Thio N, Torres MC, Traficante N, Xing Z, Zethoven M, Antill YC, Scott CL, Campbell IG, Gorringe KL. Nat Commun. 2019 Sep 2;10(1):3935.

     

  8. Adjuvant immunosuppression for paradoxical deterioration in tuberculous meningitis including one case responsive to cyclosporine. A tertiary referral hospital experience. Ledingham D, El-Wahsh S, Sebire D, Cappelen-Smith C, Hodgkinson SJ, McDougall AJ, Maley M, Cordato DJ. J Neurol Sci. 2019 Sep 15;404:58-62.

     

  9. Loss of nuclear localization of thyroid transcription factor 1 and adverse outcomes in papillary thyroid cancer. Lopez-Campistrous A, Thiesen A, Gill AJ, Ghosh S, McMullen TP. Hum Pathol. 2019 Sep;91:36-42.

     

  10. PARAGON: A Phase II study of anastrozole in patients with estrogen receptor-positive recurrent/metastatic low-grade ovarian cancers and serous borderline ovarian tumors. Tang M, O'Connell RL, Amant F, Beale P, McNally O, Sjoquist KM, Grant P, Davis A, Sykes P, Mileshkin L, Moujaber T, Kennedy CJ, deFazio A, Tan K, Antill Y, Goh J, Bonaventura T, Scurry J, Friedlander M. Gynecol Oncol. 2019 Sep;154(3):531-538.

     

  11. The tumour microenvironment is immuno-tolerogenic and a principal determinant of patient outcome in EBV-positive diffuse large B-cell lymphoma. Keane C, Tobin J, Gunawardana J, Francis S, Gifford G, Gabrielli S, Gill A, Stevenson W, Talaulikar D, Gould C, Jain S, Birch S, Hertzberg M, Gandhi MK. Eur J Haematol. 2019 Sep;103(3):200-207.

     

  12. Pathogenic variants in PLOD3 result in a Stickler syndrome-like connective tissue disorder with vascular complications. Ewans LJ, Colley A, Gaston-Massuet C, Gualtieri A, Cowley MJ, McCabe MJ, Anand D, Lachke SA, Scietti L, Forneris F, Zhu Y, Ying K, Walsh C, Kirk EP, Miller D, Giunta C, Sillence D, Dinger M, Buckley M, Roscioli T. J Med Genet. 2019 Sep;56(9):629-638.

     

  13. Inhibition of Interleukin 1β Signaling by Anakinra Ameliorates Proinflammatory Cytokine Responses in Zika Virus-Infected Human Blood-Brain Barrier Endothelial Cells. Hueston L, Grau GE, Mahalingam S. J Infect Dis. 2019 Sep 26;220(9):1539-1540.

     

  14. Dispersal of the Mosquito Aedes vigilax (Diptera: Culicidae) From Urban Estuarine Wetlands in Sydney, Australia. Webb CE, Russell RC. J Med Entomol. 2019 Sep 3;56(5):1290-1295.

     

  15. Elevation of Postmortem Cerebrospinal Fluid Sodium and Chloride Levels Is a Potential Adjunct Test in the Diagnosis of Salt Water Drowning. Garland J, McCarthy S, Hensby-Bennett S, Philcox W, OʼRegan T, Rousseau G, Palmiere C, Elstub H, Cala A, Clifton L, Lam L, Barker C, Ondruschka B, Woydt L, Spark A, Kesha K, Morrow P, Glenn C, Stables S, Tse R. Am J Forensic Med Pathol. 2019 Sep;40(3):251-257.

     

  16. The effects of different sampling techniques on peripheral post mortem tryptase levels: a recommended sampling method. Garland J, Philcox W, McCarthy S, Hensby-Bennet S, Ondruschka B, Woydt L, Da Broi U, Palmiere C, Lam L, Ahn Y, Kesha K, Stables S, Tse R. Int J Legal Med. 2019 Sep;133(5):1477-1483.

 

AUGUST

  1. Recurrent and de novo Glomerulonephritis After Kidney Transplantation. Lim WH, Shingde M, Wong G. Front Immunol. 2019 Aug 14; 10:1944.

     

  2. CAF hierarchy driven by pancreatic cancer cell p53-status creates a pro-metastatic and chemoresistant environment via perlecan. Vennin C, Mélénec P, Rouet R, Nobis M, Cazet AS, Murphy KJ, Herrmann D, Reed DA, Lucas MC, Warren SC, Elgundi Z, Pinese M, Kalna G, Roden D, Samuel M, Zaratzian A, Grey ST, Da Silva A, Leung W; Australian Pancreatic Genome Initiative (APGI), Mathivanan S, Wang Y, Braithwaite AW, Christ D, Benda A, Parkin A, Phillips PA, Whitelock JM, Gill AJ, Sansom OJ, Croucher DR, Parker BL, Pajic M, Morton JP, Cox TR, Timpson P. Nat Commun. 2019 Aug 12;10(1):3637.

     

  3. New Advances in the Management of Cytomegalovirus in Allogeneic Haemopoietic Stem Cell Transplantation. Yong MK, Gottlieb D, Lindsay J, Kok J, Rawlinson W, Slavin M, Ritchie D, Bajel A, Grigg A. Intern Med J. 2019 Aug 12.

     

  4. Timing of respiratory virus molecular testing in emergency departments and its association with patient care outcomes: a retrospective observational study across six Australian hospitals. Wabe N, Li L, Dahm MR, Lindeman R, Yimsung R, Clezy K, Thomas J, Varndell W, Westbrook J, Georgiou A. BMJ Open. 2019 Aug 8;9(8):e030104.

     

  5. Central Nervous System Cryptococcal Infections in Non-HIV Infected Patients. Beardsley J, Sorrell TC, Chen SC. J Fungi (Basel). 2019 Aug 2;5(3). pii: E71.

     

  6. Sarcina in an Adolescent With Repaired Esophageal Atresia: A Pathogen or a Benign Commensal? Singh H, Weber MA, Low J, Krishnan U. J Pediatr Gastroenterol Nutr. 2019 Aug;69(2):e57.

     

  7. Men Who Have Sex With Men With Mycoplasma genitalium-Positive Nongonococcal Urethritis Are More Likely to Have Macrolide-Resistant Strains Than Men With Only Female Partners: A Prospective Study. McIver R, Jalocon D, McNulty A, Jeoffreys NJ, Chen SC, Power M, Couldwell DL. Sex Transm Dis. 2019 Aug;46(8):513-517.

     

  8. Infections in pregnancy. Keighley CL, Skrzypek HJ, Wilson A, Bonning MA, Gilbert GL. Med J Aust. 2019 Aug;211(3):134-141.

     

  9. Patient-Derived Cytomegaloviruses with Different Ganciclovir Sensitivities from UL97 Mutation Retain Their Replication Efficiency and Some Kinase Activity In Vitro. Wong DD, van Zuylen WJ, Hamilton ST, Steingruber M, Sonntag E, Marschall M, Rawlinson WD. Antimicrob Agents Chemother. 2019 Aug 23;63(9).

     

  10. Audit of stool testing performed in a microbiology laboratory: will using fixed predefined clinical criteria for stool testing of Giardia and Cryptosporidium lead to missed cases? Chavada R, Maze D, Dewit D. Pathology. 2019 Aug;51(5):553-555.

     

  11. Epstein-Barr virus positive mucocutaneous ulcer of vulva. Ansar S, Mahadik A, Chow C, Papapetros I, Lee CS. Pathology. 2019 Aug;51(5):543-544.

     

  12. Primary squamous carcinoma of breast - a rare entity: report of two cases and review of the literature. Vythianathan M, Fox P, Rhodes G, Armes JE. Pathology. 2019 Aug;51(5):529-531.

     

  13. Glibenclamide treatment in a Cantú syndrome patient with a pathogenic ABCC9 gain-of-function variant: Initial experience. Ma A, Gurnasinghani S, Kirk EP, McClenaghan C, Singh GK, Grange DK, Pandit C, Zhu Y, Roscioli T, Elakis G, Buckley M, Mehta B, Roberts P, Mervis J, Biggin A, Nichols CG. Am J Med Genet A. 2019 Aug;179(8):1585-1590.

     

  14. Neutralising rivaroxaban induced interference in laboratory testing for lupus anticoagulant (LA): A comparative study using DOAC Stop and andexanet alfa. Favaloro EJ, Gilmore G, Arunachalam S, Mohammed S, Baker R. Thromb Res. 2019 Aug;180:10-19.

     

  15. Urinary piperacillin/tazobactam pharmacokinetics in vitro to determine the pharmacodynamic breakpoint for resistant Enterobacteriaceae. Gould M, Ginn AN, Marriott D, Norris R, Sandaradura I. Int J Antimicrob Agents. 2019 Aug;54(2):240-244.

     

  16. Molecular epidemiology of methicillin-resistant Staphylococcus aureus isolates in New South Wales, Australia, 2012-2017. Dotel R, O'Sullivan MVN, Davis JS, Newton PJ, Gilbert GL. Infect Dis Health. 2019 Aug;24(3):134-140.

     

  17. SMARCA4 Loss Is Very Rare in Thoracic Mesothelioma. Ahadi MS, Gill AJ. Am J Surg Pathol. 2019 Aug;43(8):1154-1155.

     

  18. Impact of low volume citrate tubes on results of first-line hemostasis testing. Salvagno GL, Demonte D, Poli G, Favaloro EJ, Lippi G. Int J Lab Hematol. 2019 Aug;41(4):472-477.

     

  19. Understanding the "philosophy" of laboratory hemostasis. Lippi G, Adcock D, Favaloro EJ. Diagnosis (Berl). 2019 Aug 27;6(3):223-226.

     

  20. Retrospective evaluation of repeated supratherapeutic ingestion (RSTI) of paracetamol †. Egan H, Isbister GK, Robinson J, Downes M, Chan BS, Vecellio E, Chiew AL. Clin Toxicol (Phila). 2019 Aug;57(8):703-711.

     

  21. The Model List of Essential In Vitro Diagnostics: nuisance or opportunity? Lippi G, Plebani M, Favaloro EJ. Diagnosis (Berl). 2019 Aug 27;6(3):187-188.

 

JULY

  1. Fungal Kinases With a Sweet Tooth: Pleiotropic Roles of Their Phosphorylated Inositol Sugar Products in the Pathogenicity of Cryptococcus neoformans Present Novel Drug Targeting Opportunities. Lev S, Li C, Desmarini D, Sorrell TC, Saiardi A, Djordjevic JT. Front Cell Infect Microbiol. 2019 Jul 15; 9:248.

     

  2. Dual DNA Barcoding for the Molecular Identification of the Agents of Invasive Fungal Infections. Hoang MTV, Irinyi L, Chen SCA, Sorrell TC; ISHAM Barcoding of Medical Fungi Working Group, Meyer W. Front Microbiol. 2019 Jul 18; 10:1647.

     

  3. Colorectal carcinoma in the course of inflammatory bowel diseases. Hnatyszyn A, Hryhorowicz S, Kaczmarek-Ryś M, Lis E, Słomski R, Scott RJ, Pławski A. Hered Cancer Clin Pract. 2019 Jul 12;17:18.

     

  4. Identification of diverse arthropod associated viruses in native Australian fleas. Harvey E, Rose K, Eden JS, Lawrence A, Doggett SL, Holmes EC. Virology. 2019 Jul 9;535:189-199.

     

  5. Circulating human papillomavirus DNA detection in Barrett's dysplasia and esophageal adenocarcinoma. Parameshwaran K, Sharma P, Rajendra S, Stelzer-Braid S, Xuan W, Rawlinson WD. Dis Esophagus. 2019 Jul 17.

     

  6. Carbapenem sparing in the management of post-transrectal prostate biopsy bacteraemia. Trad MA, Materne M, Reynolds G, Yao J, Miyakis S, Skyring T, Newton P. ANZ J Surg. 2019 Jul;89(7-8):935-939.

     

  7. Current and Emerging Direct Oral Anticoagulants: State-of-the-Art. Lippi G, Gosselin R, Favaloro EJ. Semin Thromb Hemost. 2019 Jul;45(5):490-501.

     

  8. Vascular Disease and Dementia: Lipoprotein(a) as a Neglected Link. Lippi G, Danese E, Favaloro EJ. Semin Thromb Hemost. 2019 Jul;45(5):544-547.

     

  9. Assessing cross-reactivity to neuromuscular blocking agents by skin and basophil activation tests in patients with neuromuscular blocking agent anaphylaxis. Li J, Best OG, Rose MA, Green SL, Fulton RB, Capon MJ, Krupowicz BA, Fernando SL. Br J Anaesth. 2019 Jul;123(1):e144-e150.

     

  10. Integrating basophil activation tests into evaluation of perioperative anaphylaxis to neuromuscular blocking agents. Li J, Best OG, Rose MA, Green SL, Fulton RB, Fernando SL. Br J Anaesth. 2019 Jul;123(1):e135-e143.

     

  11. BRAF V600E immunohistochemistry demonstrates that some sessile serrated lesions with adenomatous dysplasia may represent collision lesions. Bettington M, Liu C, Gill A, Walker N, Leggett B, Whitehall V, Rosty C. Histopathology. 2019 Jul;75(1):81-87.

 

JUNE

  1. CHTOP in Chemoresistant Epithelial Ovarian Cancer: A Novel and Potential Therapeutic Target. Feng X, Bai X, Ni J, Wasinger VC, Beretov J, Zhu Y, Graham P, Li Y. Front Oncol. 2019 Jun 27;9:557.

     

  2. A combination of the immunohistochemical markers CK7 and SATB2 is highly sensitive and specific for distinguishing primary ovarian mucinous tumors from colorectal and appendiceal metastases. Meagher NS, Wang L, Rambau PF, Intermaggio MP, Huntsman DG, Wilkens LR, El-Bahrawy MA, Ness RB, Odunsi K, Steed H, Herpel E, Anglesio MS, Zhang B, Lambie N, Swerdlow AJ, Lubiński J, Vierkant RA, Goode EL, Menon U, Toloczko-Grabarek A, Oszurek O, Bilic S, Talhouk A, García-Closas M, Wang Q, Tan A, Farrell R, Kennedy CJ, Jimenez-Linan M, Sundfeldt K, Etter JL, Menkiszak J, Goodman MT, Klonowski P, Leung Y, Winham SJ, Moysich KB, Behrens S, Kluz T, Edwards RP, Gronwald J, Modugno F, Hernandez BY, Chow C, Kelemen LE, Keeney GL, Carney ME, Natanzon Y, Robertson G, Sharma R, Gayther SA, Alsop J, Luk H, Karpinskyj C, Campbell I, Sinn P, Gentry-Maharaj A, Coulson P, Chang-Claude J, Shah M, Widschwendter M, Tang K, Schoemaker MJ, Koziak JM, Cook LS, Brenton JD, Daley F, Kristjansdottir B, Mateoiu C, Larson MC, Harnett PR, Jung A, deFazio A, Gorringe KL, Pharoah PDP, Minoo P, Stewart C, Bathe OF, Gui X, Cohen P, Ramus SJ, Köbel M. Mod Pathol. 2019 Dec;32(12):1834-1846.

     

  3. Inhibition of PI3K/Akt/mTOR signaling pathway alleviates ovarian cancer chemoresistance through reversing epithelial-mesenchymal transition and decreasing cancer stem cell marker expression. Deng J, Bai X, Feng X, Ni J, Beretov J, Graham P, Li Y. BMC Cancer. 2019 Jun 24;19(1):618.

     

  4. Corrigendum to "Whole-genome sequencing reveals genetic signature of bedaquiline resistance in a clinical isolate of Mycobacterium tuberculosis" [J Glob Antimicrob Resist 15 (2018) 103-104]. Chawla K, Martinez E, Kumar A, Shenoy VP, Sintchenko V. J Glob Antimicrob Resist. 2019 Jun;17:326.

     

  5. Transvascular Pacing of Aorticorenal Ganglia Provides a Testable Procedural Endpoint for Renal Artery Denervation. Qian PC, Barry MA, Lu J, Pouliopoulos J, Mina A, Bandodkar S, Alvarez S, James V, Ronquillo J, Varikatt W, Thiagalingam A, Thomas SP. JACC Cardiovasc Interv. 2019 Jun 24;12(12):1109-1120.

     

  6. Comparing theory and non-theory based implementation approaches to improving referral practices in cancer genetics: a cluster randomised trial protocol. Morrow A, Hogden E, Kang YJ, Steinberg J, Canfell K, Solomon MJ, Kench JG, Gill AJ, Shaw T, Pachter N, Parkinson B, Wolfenden L, Mitchell G, Macrae F, Tucker K, Taylor N. Trials. 2019 Jun 20;20(1):373.

     

  7. Punch biopsy is best avoided for clinically suspicious pigmented lesions. Adybeik D, Ciranni D, Alaei LM. Aust J Gen Pract. 2019 Jun;48(6):354-356.

     

  8. Circadian rhythms in insecticide susceptibility, metabolic enzyme activity, and gene expression in Cimex lectularius (Hemiptera: Cimicidae). Khalid MF, Lee CY, Doggett SL, Veera Singham G. PLoS One. 2019 Jun 17;14(6):e0218343.

     

  9. Shortening of telomere length by metabolic factors in diabetes: protective effects of fenofibrate. Sutanto SSI, McLennan SV, Keech AC, Twigg SM. J Cell Commun Signal. 2019 Jun 15.

     

  10. Prevalence of antibiotic allergy labels and their consequences in people presenting to a teaching hospital Emergency Department; a retrospective chart review. Gulholm T, Overton K, Clezy K, Torda A, Post JJ. Asian Pac J Allergy Immunol. 2019 Jun 4.

     

  11. RET Kinase-Regulated MicroRNA-153-3p Improves Therapeutic Efficacy in Medullary Thyroid Carcinoma. Joo LJS, Weiss J, Gill AJ, Clifton-Bligh R, Brahmbhatt H, MacDiarmid JA, Gild ML, Robinson BG, Zhao JT, Sidhu SB. Thyroid. 2019 Jun;29(6):830-844.

     

  12. microRNA-431 as a Chemosensitizer and Potentiator of Drug Activity in Adrenocortical Carcinoma. Kwok GTY, Zhao JT, Glover AR, Gill AJ, Clifton-Bligh R, Robinson BG, Ip JCY, Sidhu SB. Oncologist. 2019 Jun;24(6):e241-e250.

     

  13. SELDI-TOF MS Analysis of Hepatocellular Carcinoma in an Australian Cohort. Schlichtemeier SM, Nahm CB, Xue A, Gill AJ, Smith RC, Hugh TJ. J Surg Res. 2019 Jun;238:127-136.

     

  14. MiRNA-3653 Is a Potential Tissue Biomarker for Increased Metastatic Risk in Pancreatic Neuroendocrine Tumours. Gill P, Kim E, Chua TC, Clifton-Bligh RJ, Nahm CB, Mittal A, Gill AJ, Samra JS. Endocr Pathol. 2019 Jun;30(2):128-133.

     

  15. Revisiting the Significance of Prominent C Cells in the Thyroid. Fuchs TL, Bell SE, Chou A, Gill AJ. Endocr Pathol. 2019 Jun;30(2):113-117.

     

  16. Research Perspective on Utilizing and Valuing Tumor Biobanks. Rush A, Matzke L, Cooper S, Gedye C, Byrne JA, Watson PH. Biopreserv Biobank. 2019 Jun;17(3):219-229.

     

  17. Analytical performance of the new D-dimer and antithrombin assay on Roche cobas t 711 analyzer. Salvagno GL, Lippi G, Gelati M, Poli G, Favaloro EJ. Int J Lab Hematol. 2019 Jun;41(3):e54-e56.

     

  18. Comparison of Wells and YEARS clinical decision rules with D-dimer for low-risk pulmonary embolus patients. McLenachan CJ, Chua O, Chan BSH, Vecellio E, Chiew AL. Intern Med J. 2019 Jun;49(6):739-744.

 

MAY

  1. Comparison of Inhibitory Effects of Safflower Decoction and Safflower Injection on Protein and mRNA Expressions of iNOS and IL-1β in LPS-Activated RAW264.7 Cells. Liao H, Li Y, Zhai X, Zheng B, Banbury L, Zhao X, Li R. J Immunol Res. 2019 May 6;2019:1018274.

     

  2. Inter- and intrapatient heterogeneity of indoleamine 2,3-dioxygenase expression in primary and metastatic melanoma cells and the tumour microenvironment. Gide TN, Allanson BM, Menzies AM, Ferguson PM, Madore J, Saw RPM, Thompson JF, Long GV, Wilmott JS, Scolyer RA. Histopathology. 2019 May;74(6):817-828.

     

  3. Danger of false negative (exclusion) or false positive (diagnosis) for 'congenital thrombophilia' in the age of anticoagulants. Favaloro EJ. Clin Chem Lab Med. 2019 May 27;57(6):873-882.

     

  4. Response to Suthers and Mina. Kirk EP, Barlow-Stewart K, Josephi-Taylor S, Roscioli T. Genet Med. 2019 May;21(5):1258.

     

  5. A case of amoebic colitis following remote historical exposure. Parikh R, Millar E, Phan-Thien KC. ANZ J Surg. 2019 May;89(5):E222-E223.

 

APRIL

  1. Constant-Moderate and High-Intensity Interval Training Have Differential Benefits on Insulin Sensitive Tissues in High-Fat Fed Mice. Martinez-Huenchullan SF, Ban LA, Olaya-Agudo LF, Maharjan BR, Williams PF, Tam CS, Mclennan SV, Twigg SM. Front Physiol. 2019 Apr 25;10:459.

     

  2. Influenza: overview on prevention and therapy. Robson C, Baskar SR, Booy R, Ferguson PE, Gilroy N, Kok J, Sandaradura I, Dwyer D. Aust Prescr. 2019 Apr;42(2):51-55.

     

  3. Knowledge of congenital cytomegalovirus (CMV) in pregnant women in Australia is low, and improved with education. Lazzaro A, Vo ML, Zeltzer J, Rawlinson W, Nassar N, Daly K, Lainchbury A, Shand A. Aust N Z J Obstet Gynaecol. 2019 Apr 26.

     

  4. Binucleation of male accessory gland cells in the common bed bug Cimex lectularius. Takeda K, Yamauchi J, Miki A, Kim D, Leong XY, Doggett SL, Lee CY, Adachi-Yamada T. Sci Rep. 2019 Apr 24;9(1):6500.

     

  5. Men who have sex with men with Mycoplasma genitalium-positive nongonococcal urethritis are more likely to have macrolide resistant strains than men with only female partners: a prospective study. McIver R, Jalocon D, McNulty A, Jeoffreys NJ, Chen SC, Power M, Couldwell DL. Sex Transm Dis. 2019 Apr 17.

     

  6. Network properties of salmonella epidemics. Cliff OM, Sintchenko V, Sorrell TC, Vadlamudi K, McLean N, Prokopenko M. Sci Rep. 2019 Apr 16;9(1):6159.

     

  7. User Acceptability of Whole Exome Reproductive Carrier Testing for Consanguineous Couples in Australia. Josephi-Taylor S, Barlow-Stewart K, Selvanathan A, Roscioli T, Bittles A, Meiser B, Worgan L, Rajagopalan S, Colley A, Kirk EP. J Genet Couns. 2019 Apr;28(2):240-250.

     

  8. Recent Advances in Mainstream Hemostasis Diagnostics and Coagulation Testing. Favaloro EJ, Lippi G. Semin Thromb Hemost. 2019 Apr;45(3):228-246.

     

  9. Out-of-Africa, human-mediated dispersal of the common cat flea, Ctenocephalides felis: The hitchhiker's guide to world domination. Lawrence AL, Webb CE, Clark NJ, Halajian A, Mihalca AD, Miret J, D'Amico G, Brown G, Kumsa B, Modrý D, Šlapeta J. Int J Parasitol. 2019 Apr;49(5):321-336.

     

  10. Australasian Gastrointestinal Pathology Society (AGPS) consensus guidelines for universal defective mismatch repair testing in colorectal carcinoma. Yozu M, Kumarasinghe MP, Brown IS, Gill AJ, Rosty C. Pathology. 2019 Apr;51(3):233-239.

     

  11. Evaluation of the BioGX BD-Max PCR assay for detection of pathogenic Bordetella. Timms VJ, Fong W, Jeoffreys NJ, Sintchenko V. Pathology. 2019 Apr;51(3):323-324.

     

  12. The impact of rapid molecular diagnostic testing for respiratory viruses on outcomes for emergency department patients. Wabe N, Li L, Lindeman R, Yimsung R, Dahm MR, Clezy K, McLennan S, Westbrook J, Georgiou A. Med J Aust. 2019 Apr;210(7):316-320.

     

  13. Transfusion-associated circulatory overload in ambulatory patients. Simpson JD, Hopkins A, Amil A, Ross B, Enjeti AK. Vox Sang. 2019 Apr;114(3):216-222.

     

  14. Analytical Assessment of the New Roche Cobas t 711 Fully Automated Coagulation Analyzer. Lippi G, Salvagno GL, Gelati M, Poli G, Giavarina D, Favaloro EJ. Semin Thromb Hemost. 2019 Apr;45(3):308-314.

     

  15. Laboratory testing for lupus anticoagulant (LA) in patients taking direct oral anticoagulants (DOACs): potential for false positives and false negatives. Favaloro EJ, Mohammed S, Curnow J, Pasalic L. Pathology. 2019 Apr;51(3):292-300.

     

  16. Reanalysis and optimisation of bioinformatic pipelines is critical for mutation detection. Cowley MJ, Liu YC, Oliver KL, Carvill G, Myers CT, Gayevskiy V, Delatycki M, Vlaskamp DRM, Zhu Y, Mefford H, Buckley MF, Bahlo M, Scheffer IE, Dinger ME, Roscioli T. Hum Mutat. 2019 Apr;40(4):374-379.

     

  17. Should phosphatidylethanol be currently analysed using whole blood, dried blood spots or both? Nguyen VL, Fitzpatrick M. Clin Chem Lab Med. 2019 Apr 24;57(5):617-622.

 

 

MARCH

  1. Preconception and antenatal carrier screening for genetic conditions: The critical role of general practitioners. Delatycki MB, Laing NG, Moore SJ, Emery J, Archibald AD, Massie J, Kirk EP. Aust J Gen Pract. 2019 Mar;48(3):106-110.

     

  2. Comparing immunochromatography with latex antigen agglutination testing for the diagnosis of cryptococcosis in cats, dogs and koalas. Krockenberger MB, Marschner C, Martin P, Reppas G, Halliday C, Schmertmann LJ, Harvey AM, Malik R. Med Mycol. 2019 Mar 9.

     

  3. Sarcina Ventriculi in a patient with repaired Esophageal Atresia: a benign commensal? Singh H, Weber M, Low J, Krishnan U. J Pediatr Gastroenterol Nutr. 2019 Mar 15.

     

  4. Identification of a novel lineage of plasmids within phylogenetically diverse subclades of IncHI2-ST1 plasmids. Roy Chowdhury P, Fourment M, DeMaere MZ, Monahan L, Merlino J, Gottlieb T, Darling AE, Djordjevic SP. Plasmid. 2019 Mar;102:56-61.

     

  5. To Maintain or Cease Non-Vitamin K Antagonist Oral Anticoagulants Prior to Minimal Bleeding Risk Procedures: A Review of Evidence and Recommendations. Brennan Y, Favaloro EJ, Curnow J. Semin Thromb Hemost. 2019 Mar;45(2):171-179.

     

  6. Systematic review of ganciclovir pharmacodynamics during the prevention of cytomegalovirus infection in adult solid organ transplant recipients. Wong DD, van Zuylen WJ, Craig ME, Rawlinson WD. Rev Med Virol. 2019 Mar;29(2):e2023.

     

  7. Impact of Rapid Molecular Diagnostic Testing of Respiratory Viruses on Outcomes of Adults Hospitalized with Respiratory Illness: a Multicenter Quasi-experimental Study. Wabe N, Li L, Lindeman R, Yimsung R, Dahm MR, McLennan S, Clezy K, Westbrook JI, Georgiou A. J Clin Microbiol. 2019 Mar 28;57(4).

     

  8. Harms and Benefits of Using Aspirin for Primary Prevention of Cardiovascular Disease: A Narrative Overview. Lippi G, Danese E, Favaloro EJ. Semin Thromb Hemost. 2019 Mar;45(2):157-163.

     

  9. Beyond the panel: preconception screening in consanguineous couples using the TruSight One "clinical exome". Kirk EP, Barlow-Stewart K, Selvanathan A, Josephi-Taylor S, Worgan L, Rajagopalan S, Cowley MJ, Gayevskiy V, Bittles A, Burnett L, Elakis G, Lo W, Buckley M, Colley A, Roscioli T. Genet Med. 2019 Mar;21(3):608-612.

 

 

FEBRUARY

  1. Microangiopathy in snake bites-bubble trouble: Response to commentary. Enjeti AK, Lincz LF, Seldon M, Isbister GK. Res Pract Thromb Haemost. 2019 Feb 15;3(2):298-299.

     

  2. Cranial aspergillosis in a patient receiving ibrutinib for chronic lymphocytic leukemia. Beresford R, Dolot V, Foo H. Med Mycol Case Rep. 2019 Feb 28;24:27-29.

     

  3. Under-detection of Acute Kidney Injury in Hospitalised Patients - A Retrospective, multi-site, longitudinal study. Campbell CA, Li L, Kotwal S, Georgiou A, Horvath AR, Westbrook J, Endre Z. Intern Med J. 2019 Feb 28.

     

  4. Case report of a child bearing a novel deleterious splicing variant in PIGT. Mason S, Castilla-Vallmanya L, James C, Andrews PI, Balcells S, Grinberg D, Kirk EP, Urreizti R. Medicine (Baltimore). 2019 Feb;98(8):e14524.

     

  5. The First Case Report of Schnitzler Syndrome Presenting with Eye Pain. Sadig RR, Wakefield D, Fraser CL. Ocul Immunol Inflamm. 2019 Feb 22:1-3.

     

  6. How to Optimize Activated Partial Thromboplastin Time (APTT) Testing: Solutions to Establishing and Verifying Normal Reference Intervals and Assessing APTT Reagents for Sensitivity to Heparin, Lupus Anticoagulant, and Clotting Factors. Favaloro EJ, Kershaw G, Mohammed S, Lippi G. Semin Thromb Hemost. 2019 Feb;45(1):22-35.

     

  7. How to Generate a More Accurate Laboratory-Based International Normalized Ratio: Solutions to Obtaining or Verifying the Mean Normal Prothrombin Time and International Sensitivity Index. Favaloro EJ. Semin Thromb Hemost. 2019 Feb;45(1):10-21.

     

  8. Myocardial Infarction, Unstable Angina, and White Thrombi: Time to Move Forward? Lippi G, Favaloro EJ. Semin Thromb Hemost. 2019 Feb;45(1):115-116.

 

 

JANUARY

  1. Multilocus Sequence Typing (MLST) of Chlamydiales. Jelocnik M, Polkinghorne A, Pannekoek Y. Methods Mol Biol. 2019;2042:69-86.

     

  2. Pre-treatment antiviral resistance in Australians with chronic hepatitis C: prevalence of NS3 and NS5A resistance data in the state of New South Wales. Ong AT, Tay E, Dwyer DE, George J, Douglas MW. Antivir Ther. 2019;24(4):281-290.

     

  3. Iron levels, genes involved in iron metabolism and antioxidative processes and lung cancer incidence. Sukiennicki GM, Marciniak W, Muszyńska M, Baszuk P, Gupta S, Białkowska K, Jaworska-Bieniek K, Durda K, Lener M, Pietrzak S, Gromowski T, Prajzendanc K, Łukomska A, Waloszczyk P, Wójcik JZ, Scott R, Lubiński J, Jakubowska A. PLoS One. 2019 Jan 14;14(1):e0208610.

     

  4. Emicizumab (ACE910): Clinical background and laboratory assessment of hemophilia A. Lippi G, Favaloro EJ. Adv Clin Chem. 2019;88:151-167.

     

  5. Selective modulation of Wnt-binding receptor tyrosine kinase ROR2 expression by human cytomegalovirus regulates trophoblast migration. Huynh KT, van Zuylen WJ, Ford CE, Rawlinson WD. J Gen Virol. 2019 Jan;100(1):99-104.

     

  6. CSF neopterin, a useful biomarker in children presenting with influenza associated encephalopathy? Macdonald-Laurs E, Koirala A, Britton PN, Rawlinson W, Hiew CC, Mcrae J, Dale RC, Jones C, Macartney K, McMullan B, Pillai S. Eur J Paediatr Neurol. 2019 Jan;23(1):204-213.

     

  7. Cytomegalovirus infection in day care centres: A systematic review and meta-analysis of prevalence of infection in children. Zheng QY, Huynh KT, van Zuylen WJ, Craig ME, Rawlinson WD. Rev Med Virol. 2019 Jan;29(1):e2011.

     

  8. Low-level parental mosaicism in an apparent de novo case of Peutz-Jeghers syndrome. Butel-Simoes GI, Spigelman AD, Scott RJ, Vilain RE. Fam Cancer. 2019 Jan;18(1):109-112.

     

  9. Lessons learnt from local real-life experience with idarucizumab for the reversal of dabigatran. Brennan Y, Favaloro EJ, Pasalic L, Keenan H, Curnow J. Intern Med J. 2019 Jan;49(1):59-65.

     

  10. Parafibromin-deficient (HPT-JT Type, CDC73 Mutated) Parathyroid Tumors Demonstrate Distinctive Morphologic Features. Gill AJ, Lim G, Cheung VKY, Andrici J, Perry-Keene JL, Paik J, Sioson L, Clarkson A, Sheen A, Luxford C, Elston MS, Meyer-Rochow GY, Nano MT, Kruijff S, Engelsman AF, Sywak M, Sidhu SB, Delbridge LW, Robinson BG, Marsh DJ, Toon CW, Chou A, Clifton-Bligh RJ. Am J Surg Pathol. 2019 Jan;43(1):35-46.